Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010455.1 Corchorus capsularis cultivar CVL-1 contig10476, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12831

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2460--2564
16
6.6
16
86
5
151
6
14
38
40
1.72
2553--2590
6
6.5
6
90
6
60
0
21
47
31
1.51
2554--2588
17
2.1
17
94
0
61
0
20
51
28
1.47
3565--3591
2
13.5
2
100
0
54
51
0
0
48
1.00
5776--5801
1
26.0
1
100
0
52
0
0
0
100
0.00
10279--10305
14
1.9
14
100
0
54
29
7
18
44
1.77

Tables:   1

The End!