Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010458.1 Corchorus capsularis cultivar CVL-1 contig10479, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12566

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1233--1433
103
2.0
103
92
2
341
27
10
22
39
1.86
2401--3408
440
2.3
440
84
2
1272
43
16
12
26
1.84
4646--4904
132
2.0
131
89
1
403
50
1
8
38
1.45
7595--7622
13
2.2
13
100
0
56
57
0
0
42
0.99
12201--12254
27
2.0
27
100
0
108
25
33
14
25
1.95
12540--12566
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!