Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010466.1 Corchorus capsularis cultivar CVL-1 contig10487, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40078

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8711--8760
24
2.1
24
100
0
100
20
30
12
38
1.88
10162--10275
31
3.7
31
92
2
176
17
20
25
36
1.94
11019--11309
107
2.8
105
88
2
424
40
9
7
42
1.67
11600--11645
13
3.6
13
88
2
58
82
2
15
0
0.76
16618--16645
2
14.0
2
100
0
56
50
0
0
50
1.00
22055--22234
34
5.5
33
72
12
156
31
16
16
36
1.91
22089--22241
31
4.7
31
69
14
103
31
17
15
35
1.91
22054--22241
65
2.9
65
91
0
304
31
17
15
35
1.91
24939--24986
25
1.9
25
95
0
87
43
6
31
18
1.75
24959--25136
97
1.8
97
97
0
338
38
12
27
21
1.90
30927--30951
2
12.5
2
100
0
50
48
0
0
52
1.00
37886--37914
14
2.1
14
100
0
58
0
13
0
86
0.58

Tables:   1

The End!