Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWWV01010470.1 Corchorus capsularis cultivar CVL-1 contig10491, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 35630
ACGTcount: A:0.32, C:0.17, G:0.18, T:0.32
Found at i:3976 original size:14 final size:14
Alignment explanation
Indices: 3957--3998 Score: 57
Period size: 14 Copynumber: 2.9 Consensus size: 14
3947 ATATATGTTT
3957 ATAGCTTTAAATTG
1 ATAGCTTTAAATTG
*
3971 ATAGCTTTAATTTG
1 ATAGCTTTAAATTG
*
3985 ACAGCTTTACAATT
1 ATAGCTTTA-AATT
3999 TCCTGCGATG
Statistics
Matches: 24, Mismatches: 3, Indels: 1
0.86 0.11 0.04
Matches are distributed among these distances:
14 21 0.88
15 3 0.12
ACGTcount: A:0.33, C:0.12, G:0.12, T:0.43
Consensus pattern (14 bp):
ATAGCTTTAAATTG
Found at i:9098 original size:54 final size:54
Alignment explanation
Indices: 9024--9126 Score: 188
Period size: 54 Copynumber: 1.9 Consensus size: 54
9014 AAAATTTTTG
* *
9024 TTTAATTGTTGCCAAAGTTTGACACCTGAAGTTGTCATACTATCCACTTAAAAC
1 TTTAATTGTTGCCAAAGTTTGACACCCGAAGATGTCATACTATCCACTTAAAAC
9078 TTTAATTGTTGCCAAAGTTTGACACCCGAAGATGTCATACTATCCACTT
1 TTTAATTGTTGCCAAAGTTTGACACCCGAAGATGTCATACTATCCACTT
9127 TAAATTATAT
Statistics
Matches: 47, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
54 47 1.00
ACGTcount: A:0.30, C:0.21, G:0.14, T:0.35
Consensus pattern (54 bp):
TTTAATTGTTGCCAAAGTTTGACACCCGAAGATGTCATACTATCCACTTAAAAC
Found at i:10461 original size:35 final size:35
Alignment explanation
Indices: 10413--10508 Score: 149
Period size: 35 Copynumber: 2.7 Consensus size: 35
10403 AGATTGTGCG
*
10413 AATTTGATTGAAGGCTCCAGAAGAGCCAGTATTTTA
1 AATTTGATTGAAGGCTCCAGAAGAGCCAGTA-TTCA
10449 AA-TTGATTGAAGGCTCCAGAAGAGCCAGTATTCA
1 AATTTGATTGAAGGCTCCAGAAGAGCCAGTATTCA
* *
10483 AATTTAATTGAAGGCTCCGGAAGAGC
1 AATTTGATTGAAGGCTCCAGAAGAGC
10509 TACTATTGTT
Statistics
Matches: 56, Mismatches: 3, Indels: 3
0.90 0.05 0.05
Matches are distributed among these distances:
34 5 0.09
35 49 0.88
36 2 0.04
ACGTcount: A:0.34, C:0.16, G:0.24, T:0.26
Consensus pattern (35 bp):
AATTTGATTGAAGGCTCCAGAAGAGCCAGTATTCA
Found at i:11658 original size:19 final size:17
Alignment explanation
Indices: 11616--11658 Score: 50
Period size: 18 Copynumber: 2.4 Consensus size: 17
11606 CCTCAAATGA
*
11616 GGTTGGGAATTTATGTT
1 GGTTTGGAATTTATGTT
11633 GGATTTGGAATTTATGGCTT
1 GG-TTTGGAATTTAT-G-TT
11653 GGTTTG
1 GGTTTG
11659 CCAATTGTCA
Statistics
Matches: 22, Mismatches: 1, Indels: 4
0.81 0.04 0.15
Matches are distributed among these distances:
17 2 0.09
18 11 0.50
19 5 0.23
20 4 0.18
ACGTcount: A:0.16, C:0.02, G:0.35, T:0.47
Consensus pattern (17 bp):
GGTTTGGAATTTATGTT
Found at i:14281 original size:15 final size:15
Alignment explanation
Indices: 14261--14299 Score: 60
Period size: 17 Copynumber: 2.5 Consensus size: 15
14251 AGAACAATCT
14261 TTCTCTTTCTCCATA
1 TTCTCTTTCTCCATA
14276 TTCTCTTCTTCTCCATA
1 TTCTC-T-TTCTCCATA
14293 TTCTCTT
1 TTCTCTT
14300 GTTCTCTCAA
Statistics
Matches: 22, Mismatches: 0, Indels: 4
0.85 0.00 0.15
Matches are distributed among these distances:
15 6 0.27
16 2 0.09
17 14 0.64
ACGTcount: A:0.10, C:0.33, G:0.00, T:0.56
Consensus pattern (15 bp):
TTCTCTTTCTCCATA
Found at i:14317 original size:17 final size:17
Alignment explanation
Indices: 14267--14318 Score: 79
Period size: 17 Copynumber: 3.1 Consensus size: 17
14257 ATCTTTCTCT
*
14267 TTCTCCATATTCTCTTC
1 TTCTCCATATTCTCTTG
14284 TTCTCCATATTCTCTTG
1 TTCTCCATATTCTCTTG
14301 TTCTCTCA-ATTCTCTTG
1 TTCTC-CATATTCTCTTG
14318 T
1 T
14319 CTTTTCCATA
Statistics
Matches: 33, Mismatches: 1, Indels: 2
0.92 0.03 0.06
Matches are distributed among these distances:
17 31 0.94
18 2 0.06
ACGTcount: A:0.12, C:0.31, G:0.04, T:0.54
Consensus pattern (17 bp):
TTCTCCATATTCTCTTG
Found at i:18402 original size:27 final size:26
Alignment explanation
Indices: 18335--18405 Score: 90
Period size: 26 Copynumber: 2.7 Consensus size: 26
18325 AGTCACTTAG
*
18335 GGGGCATTTTGGTCATCTCTACATTA
1 GGGGCATTTTGGTCATTTCTACATTA
* *
18361 AGGGAATTTTGGTCATTTGC-ACATTCA
1 GGGGCATTTTGGTCATTT-CTACATT-A
18388 GGGGCATTTTGGTCATTT
1 GGGGCATTTTGGTCATTT
18406 TAAGTCCACT
Statistics
Matches: 38, Mismatches: 5, Indels: 3
0.83 0.11 0.07
Matches are distributed among these distances:
26 20 0.53
27 18 0.47
ACGTcount: A:0.20, C:0.15, G:0.25, T:0.39
Consensus pattern (26 bp):
GGGGCATTTTGGTCATTTCTACATTA
Found at i:22231 original size:21 final size:23
Alignment explanation
Indices: 22206--22247 Score: 61
Period size: 21 Copynumber: 1.9 Consensus size: 23
22196 AGAAATCAAT
*
22206 AAAAGATGAAA-AAG-TTTTCCA
1 AAAAGATAAAAGAAGATTTTCCA
22227 AAAAGATAAAAGAAGATTTTC
1 AAAAGATAAAAGAAGATTTTC
22248 TCGCCATTTT
Statistics
Matches: 18, Mismatches: 1, Indels: 2
0.86 0.05 0.10
Matches are distributed among these distances:
21 10 0.56
22 3 0.17
23 5 0.28
ACGTcount: A:0.55, C:0.07, G:0.14, T:0.24
Consensus pattern (23 bp):
AAAAGATAAAAGAAGATTTTCCA
Found at i:23508 original size:18 final size:19
Alignment explanation
Indices: 23467--23506 Score: 55
Period size: 19 Copynumber: 2.1 Consensus size: 19
23457 ACTCTTTTGG
*
23467 TTTCCTTTTCTTTTTCTTC
1 TTTCCTTTTCTGTTTCTTC
23486 TTTCC-TTTCTGTTTCATTC
1 TTTCCTTTTCTGTTTC-TTC
23505 TT
1 TT
23507 CCCATGCATT
Statistics
Matches: 19, Mismatches: 1, Indels: 2
0.86 0.05 0.09
Matches are distributed among these distances:
18 9 0.47
19 10 0.53
ACGTcount: A:0.03, C:0.25, G:0.03, T:0.70
Consensus pattern (19 bp):
TTTCCTTTTCTGTTTCTTC
Found at i:26919 original size:48 final size:49
Alignment explanation
Indices: 26863--26979 Score: 157
Period size: 48 Copynumber: 2.4 Consensus size: 49
26853 GTCATGGTTT
* *
26863 TCAAAAATGTTTTTCAAAAGAGAGTCATGATTTTCGAAAAT-T-TCTTTC
1 TCAAAAATGTTTTTCAAAAGAGAGTCATGATTTCCAAAAATGTGT-TTTC
* *
26911 TCAAAAATGTTTTTCAAAAGAGAGTCATGGTTTCCAAAAATGTGTTTTT
1 TCAAAAATGTTTTTCAAAAGAGAGTCATGATTTCCAAAAATGTGTTTTC
*
26960 TACGAAAATGTTTTTCAAAA
1 T-CAAAAATGTTTTTCAAAA
26980 ATAGTTTTCA
Statistics
Matches: 61, Mismatches: 5, Indels: 4
0.87 0.07 0.06
Matches are distributed among these distances:
48 38 0.62
49 5 0.08
50 18 0.30
ACGTcount: A:0.37, C:0.11, G:0.14, T:0.38
Consensus pattern (49 bp):
TCAAAAATGTTTTTCAAAAGAGAGTCATGATTTCCAAAAATGTGTTTTC
Found at i:27586 original size:27 final size:27
Alignment explanation
Indices: 27556--27614 Score: 91
Period size: 27 Copynumber: 2.2 Consensus size: 27
27546 AAATGTTTTG
*
27556 GTCAAAACTTTCGAAAGGAGTTTTCGA
1 GTCAAAACTTTCGAAAAGAGTTTTCGA
* *
27583 GTCAAAACTTTTGAAAAGAGTTTTTGA
1 GTCAAAACTTTCGAAAAGAGTTTTCGA
27610 GTCAA
1 GTCAA
27615 TTAAGAGTTT
Statistics
Matches: 29, Mismatches: 3, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
27 29 1.00
ACGTcount: A:0.36, C:0.12, G:0.20, T:0.32
Consensus pattern (27 bp):
GTCAAAACTTTCGAAAAGAGTTTTCGA
Found at i:27667 original size:16 final size:16
Alignment explanation
Indices: 27636--27679 Score: 54
Period size: 16 Copynumber: 2.8 Consensus size: 16
27626 CAAGTGCAAT
27636 GAAAAAATGAAAAAGAA
1 GAAAAAATGAAAAAG-A
*
27653 GAAAAAA-GAAGAAGA
1 GAAAAAATGAAAAAGA
*
27668 GAAAAAACGAAA
1 GAAAAAATGAAA
27680 GAAAAACGAA
Statistics
Matches: 24, Mismatches: 2, Indels: 3
0.83 0.07 0.10
Matches are distributed among these distances:
15 8 0.33
16 9 0.38
17 7 0.29
ACGTcount: A:0.75, C:0.02, G:0.20, T:0.02
Consensus pattern (16 bp):
GAAAAAATGAAAAAGA
Found at i:27681 original size:17 final size:17
Alignment explanation
Indices: 27636--27696 Score: 58
Period size: 17 Copynumber: 3.6 Consensus size: 17
27626 CAAGTGCAAT
27636 GAAAAAATGAAA-AAGAA
1 GAAAAAA-GAAAGAAGAA
27653 GAAAAAAG-AAGAAG-A
1 GAAAAAAGAAAGAAGAA
*
27668 GAAAAAACGAAAGAAAAA
1 GAAAAAA-GAAAGAAGAA
27686 CG-AAAAAGAAA
1 -GAAAAAAGAAA
27697 AGCAGCTCTA
Statistics
Matches: 38, Mismatches: 1, Indels: 10
0.78 0.02 0.20
Matches are distributed among these distances:
15 10 0.26
16 5 0.13
17 16 0.42
18 6 0.16
19 1 0.03
ACGTcount: A:0.75, C:0.03, G:0.20, T:0.02
Consensus pattern (17 bp):
GAAAAAAGAAAGAAGAA
Found at i:30972 original size:38 final size:38
Alignment explanation
Indices: 30919--31167 Score: 247
Period size: 38 Copynumber: 6.6 Consensus size: 38
30909 AATTATCTTA
*
30919 CGACTGGAAACAGGTCATCTTTCAATAGTTATCAAGAT
1 CGACTGGAAACAGGTCATCTTTCAACAGTTATCAAGAT
* * * * * **
30957 CGACTGGGAATAGGTCGTCTTTCAGCAATTATC-TTA-
1 CGACTGGAAACAGGTCATCTTTCAACAGTTATCAAGAT
* *
30993 CGACCGGAAACAGGTCATCTTTCAACAGTTATCAGGAT
1 CGACTGGAAACAGGTCATCTTTCAACAGTTATCAAGAT
* *
31031 CGACTGGAAACAGGTCGTCTTTCAATAGTTATCAAGAT
1 CGACTGGAAACAGGTCATCTTTCAACAGTTATCAAGAT
* * * * **
31069 TGACTGGGAACAGGTCATCTTTCAGCAATTATC--TTT
1 CGACTGGAAACAGGTCATCTTTCAACAGTTATCAAGAT
* *
31105 CGACTGGAAACATGTCGTCTTTCAACAGTTATCAAGAT
1 CGACTGGAAACAGGTCATCTTTCAACAGTTATCAAGAT
* *
31143 CGATTGAGAAAC-GAGTCATTTTTCA
1 CGACTG-GAAACAG-GTCATCTTTCA
31168 GTAGTTTTCG
Statistics
Matches: 165, Mismatches: 40, Indels: 11
0.76 0.19 0.05
Matches are distributed among these distances:
36 55 0.33
37 2 0.01
38 94 0.57
39 14 0.08
ACGTcount: A:0.30, C:0.20, G:0.20, T:0.30
Consensus pattern (38 bp):
CGACTGGAAACAGGTCATCTTTCAACAGTTATCAAGAT
Found at i:30994 original size:74 final size:74
Alignment explanation
Indices: 30873--31054 Score: 283
Period size: 74 Copynumber: 2.5 Consensus size: 74
30863 TCCTCAAAGT
* * * * *
30873 TTATCAAAATTGACTAGGAACAGGTCGTCTTTCAGTAATTATCTTACGACTGGAAACAGGTCATC
1 TTATCAAGATCGACTGGGAACAGGTCGTCTTTCAGCAATTATCTTACGACCGGAAACAGGTCATC
*
30938 TTTCAATAG
66 TTTCAACAG
*
30947 TTATCAAGATCGACTGGGAATAGGTCGTCTTTCAGCAATTATCTTACGACCGGAAACAGGTCATC
1 TTATCAAGATCGACTGGGAACAGGTCGTCTTTCAGCAATTATCTTACGACCGGAAACAGGTCATC
31012 TTTCAACAG
66 TTTCAACAG
* *
31021 TTATCAGGATCGACTGGAAACAGGTCGTCTTTCA
1 TTATCAAGATCGACTGGGAACAGGTCGTCTTTCA
31055 ATAGTTATCA
Statistics
Matches: 98, Mismatches: 10, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
74 98 1.00
ACGTcount: A:0.30, C:0.20, G:0.20, T:0.30
Consensus pattern (74 bp):
TTATCAAGATCGACTGGGAACAGGTCGTCTTTCAGCAATTATCTTACGACCGGAAACAGGTCATC
TTTCAACAG
Found at i:31063 original size:74 final size:73
Alignment explanation
Indices: 30891--31137 Score: 280
Period size: 74 Copynumber: 3.3 Consensus size: 73
30881 ATTGACTAGG
** *
30891 AACAGGTCGTCTTTCAGTAATTATCTTACGACTGGAAACAGGTCATCTTTCAATAGTTATCAAGA
1 AACAGGTCGTCTTTCAACAATTATCTTACGACTGGAAACAGGTCATCTTTCAACAGTTATC-AGA
*
30956 TCGACTGGG
65 TCGACTGGA
* * *
30965 AATAGGTCGTCTTTCAGCAATTATCTTACGACCGGAAACAGGTCATCTTTCAACAGTTATCAGGA
1 AACAGGTCGTCTTTCAACAATTATCTTACGACTGGAAACAGGTCATCTTTCAACAGTTATCA-GA
31030 TCGACTGGA
65 TCGACTGGA
* * ** * * * * *
31039 AACAGGTCGTCTTTCAATAGTTATCAAGATTGACTGGGAACAGGTCATCTTTCAGCAATTATC-T
1 AACAGGTCGTCTTTCAACAATTATC-TTA-CGACTGGAAACAGGTCATCTTTCAACAGTTATCAG
*
31103 TTCGACTGGA
64 ATCGACTGGA
* *
31113 AACATGTCGTCTTTCAACAGTTATC
1 AACAGGTCGTCTTTCAACAATTATC
31138 AAGATCGATT
Statistics
Matches: 150, Mismatches: 20, Indels: 6
0.85 0.11 0.03
Matches are distributed among these distances:
73 1 0.01
74 120 0.80
75 1 0.01
76 28 0.19
ACGTcount: A:0.29, C:0.20, G:0.19, T:0.31
Consensus pattern (73 bp):
AACAGGTCGTCTTTCAACAATTATCTTACGACTGGAAACAGGTCATCTTTCAACAGTTATCAGAT
CGACTGGA
Found at i:31074 original size:112 final size:112
Alignment explanation
Indices: 30919--31173 Score: 377
Period size: 112 Copynumber: 2.3 Consensus size: 112
30909 AATTATCTTA
* *
30919 CGACTGGAAACAGGTCATCTTTCAATAGTTATCAAGATCGACTGGGAATAGGTCGTCTTTCAGCA
1 CGACTGGAAACAGGTCATCTTTCAATAGTTATCAAGATCGACTGGGAACAGGTCATCTTTCAGCA
*
30984 ATTATCTTACGACCGGAAACAGGTCATCTTTCAACAGTTATCAGGAT
66 ATTATCTTACGACCGGAAACAGGTCATCTTTCAACAGTTATCAAGAT
* *
31031 CGACTGGAAACAGGTCGTCTTTCAATAGTTATCAAGATTGACTGGGAACAGGTCATCTTTCAGCA
1 CGACTGGAAACAGGTCATCTTTCAATAGTTATCAAGATCGACTGGGAACAGGTCATCTTTCAGCA
* * * *
31096 ATTATCTTTCGACTGGAAACATGTCGTCTTTCAACAGTTATCAAGAT
66 ATTATCTTACGACCGGAAACAGGTCATCTTTCAACAGTTATCAAGAT
* * *
31143 CGATTGAGAAAC-GAGTCATTTTTCAGTAGTT
1 CGACTG-GAAACAG-GTCATCTTTCAATAGTT
31174 TTCGGTTGTT
Statistics
Matches: 128, Mismatches: 13, Indels: 3
0.89 0.09 0.02
Matches are distributed among these distances:
112 109 0.85
113 19 0.15
ACGTcount: A:0.30, C:0.19, G:0.20, T:0.31
Consensus pattern (112 bp):
CGACTGGAAACAGGTCATCTTTCAATAGTTATCAAGATCGACTGGGAACAGGTCATCTTTCAGCA
ATTATCTTACGACCGGAAACAGGTCATCTTTCAACAGTTATCAAGAT
Found at i:31224 original size:15 final size:15
Alignment explanation
Indices: 31204--31261 Score: 80
Period size: 15 Copynumber: 3.6 Consensus size: 15
31194 GCATTCCAAT
31204 AACTTTTCAATTTAC
1 AACTTTTCAATTTAC
31219 AACTTTTCAACATTCTAAC
1 AACTTTTC-A-ATT-T-AC
31238 AACTTTTCAATTTAC
1 AACTTTTCAATTTAC
31253 AACTTTTCA
1 AACTTTTCA
31262 GCATTCCAAC
Statistics
Matches: 39, Mismatches: 0, Indels: 8
0.83 0.00 0.17
Matches are distributed among these distances:
15 19 0.49
16 2 0.05
17 6 0.15
18 2 0.05
19 10 0.26
ACGTcount: A:0.34, C:0.22, G:0.00, T:0.43
Consensus pattern (15 bp):
AACTTTTCAATTTAC
Found at i:31233 original size:34 final size:34
Alignment explanation
Indices: 31195--31280 Score: 145
Period size: 34 Copynumber: 2.5 Consensus size: 34
31185 CCAAGGGGGG
*
31195 CATTCCAATAACTTTTCAATTTACAACTTTTCAA
1 CATTCCAACAACTTTTCAATTTACAACTTTTCAA
* *
31229 CATTCTAACAACTTTTCAATTTACAACTTTTCAG
1 CATTCCAACAACTTTTCAATTTACAACTTTTCAA
31263 CATTCCAACAACTTTTCA
1 CATTCCAACAACTTTTCA
31281 GTTTTAAGTC
Statistics
Matches: 48, Mismatches: 4, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
34 48 1.00
ACGTcount: A:0.34, C:0.26, G:0.01, T:0.40
Consensus pattern (34 bp):
CATTCCAACAACTTTTCAATTTACAACTTTTCAA
Found at i:31241 original size:19 final size:19
Alignment explanation
Indices: 31217--31280 Score: 82
Period size: 19 Copynumber: 3.6 Consensus size: 19
31207 TTTTCAATTT
31217 ACAACTTTTCAACATTCTA
1 ACAACTTTTCAACATTCTA
31236 ACAACTTTTC-A-ATT-T-
1 ACAACTTTTCAACATTCTA
* *
31251 ACAACTTTTCAGCATTCCA
1 ACAACTTTTCAACATTCTA
31270 ACAACTTTTCA
1 ACAACTTTTCA
31281 GTTTTAAGTC
Statistics
Matches: 39, Mismatches: 2, Indels: 8
0.80 0.04 0.16
Matches are distributed among these distances:
15 10 0.26
16 1 0.03
17 6 0.15
18 1 0.03
19 21 0.54
ACGTcount: A:0.34, C:0.27, G:0.02, T:0.38
Consensus pattern (19 bp):
ACAACTTTTCAACATTCTA
Found at i:31458 original size:25 final size:25
Alignment explanation
Indices: 31386--31460 Score: 114
Period size: 25 Copynumber: 3.0 Consensus size: 25
31376 CAACAGCTTT
*
31386 CAGTTTTCAGTTCAGCAGATTATAG
1 CAGTTTTCAGTTCAGCAGATTTTAG
*
31411 CAGTTTTCAATTCAGCAGATTTTAG
1 CAGTTTTCAGTTCAGCAGATTTTAG
* *
31436 CAGTTTTCAGTTCAACAGTTTTTAG
1 CAGTTTTCAGTTCAGCAGATTTTAG
31461 TATCTCACAA
Statistics
Matches: 45, Mismatches: 5, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
25 45 1.00
ACGTcount: A:0.27, C:0.16, G:0.17, T:0.40
Consensus pattern (25 bp):
CAGTTTTCAGTTCAGCAGATTTTAG
Found at i:35096 original size:15 final size:15
Alignment explanation
Indices: 35076--35111 Score: 54
Period size: 15 Copynumber: 2.4 Consensus size: 15
35066 GAAATAGGGG
* *
35076 ATTAAAAAGATATCA
1 ATTAAAAAGAAAGCA
35091 ATTAAAAAGAAAGCA
1 ATTAAAAAGAAAGCA
35106 ATTAAA
1 ATTAAA
35112 CTAAAAAATA
Statistics
Matches: 19, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
15 19 1.00
ACGTcount: A:0.64, C:0.06, G:0.08, T:0.22
Consensus pattern (15 bp):
ATTAAAAAGAAAGCA
Found at i:35149 original size:6 final size:6
Alignment explanation
Indices: 35129--35165 Score: 58
Period size: 6 Copynumber: 6.3 Consensus size: 6
35119 ATAAGCAAAG
*
35129 TAAAT- TAATTC TAAATC TAAATC TAAATC TAAATC TA
1 TAAATC TAAATC TAAATC TAAATC TAAATC TAAATC TA
35166 TGGCAATTAT
Statistics
Matches: 29, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
5 4 0.14
6 25 0.86
ACGTcount: A:0.49, C:0.14, G:0.00, T:0.38
Consensus pattern (6 bp):
TAAATC
Done.