Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010475.1 Corchorus capsularis cultivar CVL-1 contig10496, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25191

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2512--2582
34
2.1
34
94
2
126
35
25
5
33
1.79
11846--12222
186
2.0
186
98
0
736
33
12
23
30
1.92
15829--15879
25
2.0
25
100
0
102
27
23
25
23
2.00
19484--19525
16
2.4
19
77
22
56
16
4
4
73
1.17
19490--19521
16
1.9
17
93
6
57
21
6
3
68
1.26
19753--19955
83
2.4
85
86
3
286
30
12
11
45
1.77
21032--21062
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!