Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010477.1 Corchorus capsularis cultivar CVL-1 contig10498, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37206

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4255--4296
12
3.7
12
87
12
70
21
7
7
64
1.43
4253--4306
22
2.3
24
78
15
69
18
5
11
64
1.44
5823--5852
13
2.2
14
94
5
53
20
6
10
63
1.47
13794--13831
19
2.0
19
85
10
51
13
0
26
60
1.33
21462--21495
17
2.0
17
94
0
59
26
8
5
58
1.51
21478--21509
13
2.5
13
94
0
55
31
9
9
50
1.66
21826--21870
10
4.5
10
80
8
56
82
0
17
0
0.68
21826--21870
20
2.2
21
84
11
67
82
0
17
0
0.68
21830--21875
17
2.6
16
83
16
56
80
0
17
2
0.81
30124--30201
38
2.1
36
88
6
113
52
6
12
28
1.64
30835--30870
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!