Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010496.1 Corchorus capsularis cultivar CVL-1 contig10517, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24380

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1210--1247
19
2.0
19
100
0
76
42
10
10
36
1.74
8260--8292
12
2.7
12
95
4
57
15
21
3
60
1.48
18013--18051
19
2.1
18
95
4
69
15
7
20
56
1.63
18977--19022
3
15.3
3
86
13
60
36
0
0
63
0.95
18962--19033
28
2.5
29
84
11
94
38
1
2
56
1.22
18978--19033
11
5.3
10
80
18
60
39
0
1
58
1.08
18984--19033
9
5.9
9
82
15
54
40
0
2
58
1.10
18978--19033
14
4.2
13
79
18
55
39
0
1
58
1.08
21167--21204
6
6.3
6
100
0
76
18
31
0
50
1.47

Tables:   1

The End!