Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010497.1 Corchorus capsularis cultivar CVL-1 contig10518, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16590

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2269--2302
16
2.0
17
88
11
52
29
52
17
0
1.45
2338--2415
16
4.8
16
79
7
68
33
47
16
2
1.61
2355--2415
22
2.8
24
72
25
62
31
50
18
0
1.47
2334--2415
6
13.8
6
73
25
68
31
48
17
2
1.60
3158--3251
6
14.0
6
72
24
64
35
43
17
4
1.68
3158--3262
16
6.4
17
78
14
62
35
44
16
3
1.65
3190--3248
16
3.8
16
93
4
102
38
40
15
5
1.69
3172--3262
31
2.8
32
81
3
103
35
45
15
4
1.66
11320--11345
2
13.0
2
100
0
52
50
0
0
50
1.00
15826--15931
2
56.5
2
69
22
70
48
1
1
48
1.23
15830--15931
30
3.3
30
78
16
102
48
1
1
48
1.24
15852--15933
38
2.2
36
81
12
96
47
1
1
50
1.16

Tables:   1

The End!