Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010505.1 Corchorus capsularis cultivar CVL-1 contig10526, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53272

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2868--2945
25
3.1
25
100
0
156
19
23
15
42
1.89
11999--12036
17
2.3
17
90
4
60
13
5
21
60
1.52
13403--13433
16
1.9
16
93
0
53
80
3
9
6
0.99
13757--13793
16
2.3
16
90
0
56
0
37
0
62
0.96
20518--20552
14
2.6
14
90
4
54
0
17
2
80
0.84
21695--21768
35
2.1
35
100
0
148
28
20
9
41
1.83
40364--40403
20
2.0
20
85
5
53
12
15
7
65
1.47
50964--51219
107
2.4
106
86
3
325
37
11
16
35
1.84
52931--53004
29
2.5
29
84
2
103
40
16
22
20
1.91

Tables:   1

The End!