Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010509.1 Corchorus capsularis cultivar CVL-1 contig10530, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37269

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
180--214
17
2.1
17
89
10
54
68
0
11
20
1.20
1964--1991
8
3.5
8
100
0
56
25
10
28
35
1.89
6055--6086
2
16.0
2
100
0
64
50
0
0
50
1.00
24374--24465
46
2.0
46
95
0
166
32
9
21
35
1.86
35297--36539
330
3.8
331
85
4
1552
36
15
14
33
1.88
35920--37167
625
2.0
625
89
1
1910
36
16
13
32
1.88
36250--36835
296
2.0
292
88
1
866
37
17
13
32
1.88
36539--37269
332
2.2
332
94
0
1255
37
16
13
32
1.88

Tables:   1

The End!