Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010512.1 Corchorus capsularis cultivar CVL-1 contig10533, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22240

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1555--1597
14
3.0
14
73
6
50
25
6
20
46
1.76
1960--2007
24
2.0
24
95
0
87
35
22
8
33
1.84
7926--7969
3
14.7
3
81
9
54
40
0
0
59
0.98
10205--10235
16
1.9
16
93
0
53
51
0
38
9
1.35
18120--18154
11
3.2
11
91
0
61
0
2
17
80
0.84
21766--21863
49
2.0
49
89
0
151
44
10
13
31
1.77

Tables:   1

The End!