Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010517.1 Corchorus capsularis cultivar CVL-1 contig10538, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18786

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2239
321
7.0
321
87
3
3082
34
17
14
33
1.90
1--2239
969
2.3
952
87
3
3202
34
17
14
33
1.90
2559--3326
48
16.4
48
68
12
249
24
16
22
36
1.94
2559--3299
96
7.9
96
69
12
337
24
16
22
36
1.94
3590--3621
10
3.1
10
95
4
55
28
18
37
15
1.92
4922--4988
21
3.2
21
70
4
73
26
29
8
34
1.87
4892--5218
41
8.2
41
88
5
411
29
26
7
35
1.85
4892--5218
81
4.1
81
86
3
434
29
26
7
35
1.85
4892--5218
122
2.7
121
86
5
434
29
26
7
35
1.85
5146--5204
15
3.3
19
70
20
63
32
23
10
33
1.88

Tables:   1

The End!