Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010522.1 Corchorus capsularis cultivar CVL-1 contig10543, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21804

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
173--225
25
2.1
25
89
0
79
11
26
7
54
1.62
392--425
17
2.0
17
100
0
68
35
17
17
29
1.93
2989--3043
15
3.6
15
72
13
58
41
12
7
38
1.71
3051--3081
2
15.5
2
100
0
62
51
0
0
48
1.00
2978--3037
31
1.9
31
100
0
120
41
11
6
40
1.68
3212--3323
37
3.0
37
86
0
170
14
16
25
42
1.86
20938--20962
2
12.5
2
100
0
50
48
0
0
52
1.00
21571--21668
25
4.1
25
71
20
77
34
25
0
39
1.56

Tables:   1

The End!