Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010524.1 Corchorus capsularis cultivar CVL-1 contig10545, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37246

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
142--183
20
2.2
20
91
4
68
52
2
0
45
1.13
234--271
17
2.2
18
85
4
51
44
5
0
50
1.24
444--478
18
1.9
18
88
0
52
42
40
11
5
1.65
22105--22151
21
2.2
21
88
0
67
4
12
36
46
1.62
22116--22175
24
2.4
25
83
10
79
8
13
35
43
1.74
27825--27869
21
2.1
21
83
0
54
17
26
11
44
1.82
28203--28277
32
2.3
32
84
4
89
14
34
37
13
1.85
28397--28437
21
2.0
21
90
0
64
39
17
21
21
1.93

Tables:   1

The End!