Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010525.1 Corchorus capsularis cultivar CVL-1 contig10546, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60142

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1270--1336
34
1.9
36
93
6
120
10
14
11
62
1.54
3612--3640
13
2.2
13
100
0
58
13
37
13
34
1.85
4163--4249
33
2.7
33
90
1
131
11
27
42
18
1.85
19280--19487
68
3.1
68
100
0
416
37
17
12
32
1.88
24824--24855
2
16.0
2
100
0
64
50
0
0
50
1.00
27332--27363
2
16.0
2
100
0
64
50
0
0
50
1.00
49271--49309
19
2.0
21
90
10
64
58
2
12
25
1.47
54593--54738
51
2.9
51
100
0
292
27
18
20
33
1.96
59577--59900
52
6.2
52
97
0
603
32
21
22
23
1.98

Tables:   1

The End!