Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010527.1 Corchorus capsularis cultivar CVL-1 contig10548, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  121223

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7594--7642
22
2.2
22
85
0
62
63
12
0
24
1.29
7825--7865
21
2.0
21
90
0
64
41
12
12
34
1.80
7871--7903
2
17.0
2
93
6
59
51
0
0
48
1.00
10811--10849
19
2.1
19
95
0
69
51
5
0
43
1.24
26816--26899
31
2.7
31
100
0
168
32
15
20
32
1.94
45606--45803
57
3.4
57
91
2
297
24
42
9
23
1.83
53398--53433
18
2.0
18
94
0
63
2
11
33
52
1.51
75100--75130
1
31.0
1
100
0
62
100
0
0
0
0.00
86327--86402
37
2.1
37
92
5
127
34
14
14
36
1.87
101261--102456
393
3.0
395
95
2
2126
29
13
15
41
1.86
115533--115595
26
2.4
26
100
0
126
31
15
3
49
1.61
116352--116392
21
2.0
21
90
0
64
26
4
21
46
1.72
116419--116650
87
2.7
86
85
3
277
40
18
15
25
1.90
116569--116610
21
1.9
23
90
9
70
40
21
19
19
1.92

Tables:   1

The End!