Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010532.1 Corchorus capsularis cultivar CVL-1 contig10553, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63203

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3873--3996
61
2.0
62
98
1
241
24
19
16
39
1.92
4917--4968
25
2.1
25
100
0
104
32
26
11
28
1.91
5945--5980
17
2.0
19
89
10
58
61
22
5
11
1.50
6114--6148
14
2.5
14
90
0
61
37
0
62
0
0.95
17016--17270
126
2.0
126
93
0
438
28
20
20
30
1.98
25477--25520
2
22.0
2
100
0
88
0
50
0
50
1.00
26339--26364
10
2.6
10
100
0
52
19
11
7
61
1.53
60773--60798
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!