Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010535.1 Corchorus capsularis cultivar CVL-1 contig10556, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35027

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5966--5992
12
2.2
12
100
0
54
51
22
18
7
1.70
6824--6856
2
16.5
2
93
0
57
51
3
0
45
1.16
12308--12341
17
1.9
18
88
5
52
20
20
5
52
1.67
13030--13097
33
2.1
33
97
0
127
55
10
11
22
1.65
31222--31898
255
2.6
255
86
5
869
26
16
23
33
1.95
32379--35027
316
8.3
321
87
3
3631
35
17
14
31
1.90
32380--35027
961
2.8
953
87
3
3737
35
17
14
31
1.90

Tables:   1

The End!