Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010538.1 Corchorus capsularis cultivar CVL-1 contig10559, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41750

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10977--11017
3
13.7
3
100
0
82
34
0
0
65
0.93
33428--33507
40
2.0
40
100
0
160
30
22
12
35
1.91
33485--33570
41
2.1
42
93
6
149
23
16
10
50
1.76
38212--38365
77
2.0
77
93
0
263
19
19
14
46
1.83
38660--38688
3
9.7
3
100
0
58
34
31
0
34
1.58

Tables:   1

The End!