Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010540.1 Corchorus capsularis cultivar CVL-1 contig10561, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23339

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2361--2422
29
2.1
29
84
0
79
19
17
14
48
1.81
2546--2630
29
2.9
28
84
8
91
48
7
17
27
1.73
14298--14372
37
2.1
37
97
2
143
32
30
8
29
1.86
18656--18689
3
11.3
3
100
0
68
64
0
0
35
0.94
19204--19232
2
14.5
2
100
0
58
51
0
0
48
1.00
22087--22116
6
5.0
6
95
0
51
63
0
3
33
1.11

Tables:   1

The End!