Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010542.1 Corchorus capsularis cultivar CVL-1 contig10563, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67877

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11401--11430
3
9.7
3
92
7
51
3
0
63
33
1.11
34115--34169
21
2.5
22
85
5
76
65
18
5
10
1.42
34408--34471
30
2.2
30
91
2
103
48
39
3
9
1.51
34469--34506
2
19.5
2
94
5
69
50
0
0
50
1.00
38377--38437
21
2.9
21
87
0
86
59
1
0
39
1.08
43254--43390
45
3.0
45
92
2
213
31
20
24
23
1.98
44178--44211
6
5.7
6
100
0
68
32
0
17
50
1.47
48094--48288
102
1.9
102
95
0
354
25
13
35
25
1.93
55571--55600
15
2.0
15
93
0
51
43
30
20
6
1.77
65937--65980
1
44.0
1
95
0
79
97
0
0
2
0.16
66877--66901
11
2.3
11
100
0
50
48
0
0
52
1.00
67162--67186
8
3.1
8
100
0
50
16
12
0
72
1.13

Tables:   1

The End!