Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010548.1 Corchorus capsularis cultivar CVL-1 contig10569, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59124

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7895--7928
14
2.3
15
90
5
52
5
17
0
76
0.98
7889--7926
19
2.0
20
89
5
60
5
15
0
78
0.91
20179--20204
2
13.0
2
100
0
52
50
0
0
50
1.00
27795--27823
3
9.7
3
100
0
58
34
0
0
65
0.93
28603--28631
2
14.5
2
100
0
58
48
0
0
51
1.00
58154--58290
71
1.9
72
85
7
190
29
21
13
35
1.91
58920--58953
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!