Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010552.1 Corchorus capsularis cultivar CVL-1 contig10573, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50322

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2220
333
6.7
328
82
8
2452
34
16
16
32
1.91
5571--5621
23
2.2
23
85
0
66
47
23
7
21
1.77
22612--22855
127
1.9
126
94
0
434
42
18
18
21
1.90
31858--31908
24
2.1
24
92
0
84
7
43
7
41
1.63
35949--35979
8
3.8
8
95
4
53
74
0
12
12
1.08
37963--38145
45
4.1
45
87
0
213
25
17
27
29
1.97
42467--42829
117
3.1
117
84
2
458
29
31
11
26
1.92
48015--48080
33
2.0
33
93
0
114
22
19
31
25
1.98

Tables:   1

The End!