Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010555.1 Corchorus capsularis cultivar CVL-1 contig10576, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26559

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3565--3851
48
6.0
48
87
4
346
32
13
28
25
1.94
3928--3960
17
1.9
17
93
0
57
12
6
9
72
1.26
5242--5271
15
1.9
16
93
6
53
0
13
10
76
1.01
10633--10742
48
2.3
48
90
3
168
39
23
8
29
1.84
11146--11212
18
3.5
19
76
11
57
68
1
25
4
1.17

Tables:   1

The End!