Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010558.1 Corchorus capsularis cultivar CVL-1 contig10579, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40380

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--77
2
39.0
2
97
2
147
0
49
0
50
1.00
437--465
5
6.0
5
96
4
51
41
20
37
0
1.53
4177--4227
21
2.4
21
100
0
102
19
0
35
45
1.51
15750--15909
85
1.9
84
91
3
261
36
10
1
51
1.44
16006--16096
44
2.0
48
85
8
127
37
4
4
53
1.41
16507--16551
2
22.5
2
90
0
72
44
0
4
51
1.21
22240--22273
17
2.0
17
88
0
50
85
8
5
0
0.75
31483--31522
21
1.9
21
85
10
55
45
25
7
22
1.78

Tables:   1

The End!