Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010561.1 Corchorus capsularis cultivar CVL-1 contig10582, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22374

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8714--8756
12
3.5
12
90
6
68
34
18
23
23
1.96
9841--9870
3
10.3
3
92
7
53
33
36
0
30
1.58
10149--10174
10
2.6
10
100
0
52
30
7
23
38
1.83
10384--10413
11
2.7
11
94
0
51
6
3
10
80
1.01
17590--17617
2
14.0
2
100
0
56
50
0
0
50
1.00
21334--21382
3
16.3
3
100
0
98
67
0
32
0
0.91
21511--21554
5
9.0
5
90
5
72
79
0
18
2
0.83
22272--22310
3
13.0
3
100
0
78
33
0
0
66
0.92

Tables:   1

The End!