Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010562.1 Corchorus capsularis cultivar CVL-1 contig10583, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15604

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3924--3967
20
2.1
21
83
8
54
59
11
2
27
1.44
4437--4481
21
2.2
20
80
11
56
62
6
4
26
1.39
11716--11775
24
2.6
23
78
17
61
65
1
0
33
1.03
11734--11769
7
5.4
7
90
9
58
61
0
0
38
0.96
11734--11776
18
2.5
17
88
11
61
60
0
0
39
0.97
11737--11767
13
2.5
13
94
5
55
61
0
0
38
0.96
15575--15604
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!