Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010563.1 Corchorus capsularis cultivar CVL-1 contig10584, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64782

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
132--218
33
2.6
32
78
7
95
10
43
31
14
1.79
948--980
2
16.5
2
93
0
57
3
0
48
48
1.17
2331--2356
2
13.0
2
100
0
52
50
0
0
50
1.00
21808--21850
22
2.0
22
86
9
61
30
6
30
32
1.84
24401--24429
2
14.5
2
100
0
58
51
0
0
48
1.00
34850--34876
2
13.5
2
100
0
54
48
0
51
0
1.00
44085--44122
20
1.9
20
100
0
76
21
5
18
55
1.62
47029--47067
16
2.3
18
82
13
55
5
28
10
56
1.54
50930--50956
1
27.0
1
100
0
54
100
0
0
0
0.00

Tables:   1

The End!