Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010564.1 Corchorus capsularis cultivar CVL-1 contig10585, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32787

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
250--277
13
2.2
13
100
0
56
32
7
35
25
1.83
5445--5499
3
18.3
3
92
7
94
1
32
0
65
1.03
7641--7666
1
26.0
1
100
0
52
0
0
0
100
0.00
20210--20238
2
14.5
2
100
0
58
51
0
0
48
1.00
27900--27940
21
2.0
21
95
0
73
36
17
12
34
1.87
30155--32787
333
8.0
332
84
4
3169
34
17
15
33
1.91
30155--32787
656
4.0
659
83
4
3136
34
17
15
33
1.91
30162--32673
989
2.5
991
85
3
3271
34
17
15
32
1.91

Tables:   1

The End!