Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010567.1 Corchorus capsularis cultivar CVL-1 contig10588, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95673

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
574--618
7
6.4
7
85
14
58
84
15
0
0
0.62
576--616
19
2.1
19
90
9
64
87
12
0
0
0.53
3516--3579
27
2.3
27
94
2
110
7
29
7
54
1.57
5859--6158
60
5.0
60
94
0
510
25
28
15
31
1.95
38577--38619
1
43.0
1
100
0
86
0
0
0
100
0.00
38705--38759
28
2.0
28
100
0
110
47
10
14
27
1.78
66373--66412
20
2.0
20
100
0
80
50
5
10
35
1.58
87828--87856
1
29.0
1
100
0
58
100
0
0
0
0.00
88658--88689
1
32.0
1
100
0
64
0
0
0
100
0.00
89558--89637
38
2.1
38
93
2
135
18
18
12
50
1.78

Tables:   1

The End!