Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001057.1 Corchorus capsularis cultivar CVL-1 contig01057, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15610

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4460--4568
54
2.0
54
87
0
155
24
15
24
34
1.95
12948--12995
26
1.9
26
91
8
82
14
41
22
20
1.89
14037--14105
21
3.2
21
86
8
95
30
17
8
43
1.79
14283--14339
22
2.5
22
80
2
69
42
12
10
35
1.77
14350--14406
23
2.5
23
94
0
96
40
17
5
36
1.72
14434--14617
22
8.5
22
70
13
123
35
14
8
41
1.76
14434--14596
44
3.7
45
77
14
144
36
13
8
41
1.75
14723--15109
22
17.6
22
68
16
182
35
16
9
39
1.80
14696--14847
66
2.3
66
85
2
198
35
13
9
41
1.77
14948--15371
44
9.8
43
69
19
158
37
17
8
37
1.81
15101--15126
12
2.2
12
100
0
52
23
7
7
61
1.49
15127--15371
22
11.0
22
71
15
166
38
17
9
34
1.82
15151--15366
88
2.4
88
80
10
244
38
16
9
35
1.81

Tables:   1

The End!