Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010573.1 Corchorus capsularis cultivar CVL-1 contig10594, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52918

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10942--10988
21
2.2
21
82
10
60
12
23
42
21
1.87
11512--11549
2
19.0
2
94
0
67
47
0
2
50
1.15
12457--12484
5
5.6
5
100
0
56
60
0
0
39
0.97
20706--20751
21
2.2
21
88
7
67
21
2
13
63
1.40
24710--24774
31
2.2
30
91
5
105
9
13
9
67
1.41
24717--24775
31
1.9
31
100
0
118
10
11
10
67
1.42
29328--29386
31
1.9
31
89
0
91
33
18
3
44
1.67
30137--30353
111
2.0
110
87
7
320
35
10
7
46
1.68
44929--44965
6
6.2
6
93
0
65
16
37
0
45
1.47
48184--48353
85
2.0
85
92
0
286
48
17
16
17
1.81
50693--50728
1
36.0
1
100
0
72
100
0
0
0
0.00

Tables:   1

The End!