Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010574.1 Corchorus capsularis cultivar CVL-1 contig10595, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35650

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
558--600
18
2.4
17
77
11
50
9
2
16
72
1.21
3032--3066
2
17.5
2
100
0
70
48
0
0
51
1.00
3676--3724
3
16.0
3
87
4
71
0
30
2
67
1.02
3934--3996
26
2.5
25
79
7
65
42
6
3
47
1.44
15199--15229
2
15.5
2
100
0
62
48
0
0
51
1.00
18001--18033
2
16.5
2
93
0
57
48
0
0
51
1.00
27304--27344
12
3.3
12
96
3
73
43
0
0
56
0.99
27303--27356
24
2.3
24
78
18
60
44
1
0
53
1.11
29178--29265
33
2.7
32
80
3
104
12
1
32
53
1.46
32580--32610
6
5.3
6
96
3
55
51
12
0
35
1.40
33940--33998
19
2.9
21
73
21
61
35
18
3
42
1.67
33968--33999
11
2.9
11
90
0
55
43
18
0
37
1.51
33940--33999
22
2.9
22
76
19
65
36
18
3
41
1.67

Tables:   1

The End!