Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010576.1 Corchorus capsularis cultivar CVL-1 contig10597, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32256

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
627--720
46
2.0
48
87
4
138
38
12
12
36
1.82
957--991
2
17.5
2
100
0
70
48
0
0
51
1.00
1906--1936
2
15.5
2
100
0
62
48
0
0
51
1.00
2696--2723
2
14.0
2
100
0
56
50
0
0
50
1.00
14966--14996
2
15.5
2
100
0
62
48
0
0
51
1.00
24553--24587
11
3.2
11
83
0
52
77
17
5
0
0.96
31690--31754
6
10.8
6
96
0
121
15
1
0
83
0.73
32021--32069
17
2.9
16
82
14
55
36
22
18
22
1.95

Tables:   1

The End!