Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001058.1 Corchorus capsularis cultivar CVL-1 contig01058, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5936

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--105
2
53.5
2
94
3
187
0
51
0
48
1.00
1403--1458
29
1.9
29
85
7
78
32
28
19
19
1.97
4564--4730
7
24.1
7
66
10
67
16
22
3
58
1.53
4574--4795
14
15.4
14
65
18
64
17
21
3
58
1.53
4496--4625
34
3.8
34
85
2
179
18
23
6
52
1.67
4703--4921
22
10.2
21
78
11
214
22
19
3
54
1.60
4939--4987
15
3.2
15
77
13
55
28
18
4
48
1.66
5381--5501
34
3.5
34
73
14
120
27
14
8
49
1.72
5295--5513
71
3.1
71
83
7
266
26
17
8
47
1.75
5479--5779
55
5.5
55
94
0
494
24
18
7
49
1.73
5659--5744
25
3.2
25
69
20
75
23
19
6
50
1.72
5776--5835
22
2.7
22
89
5
86
21
21
5
51
1.66

Tables:   1

The End!