Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010580.1 Corchorus capsularis cultivar CVL-1 contig10601, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14568

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9960--9987
12
2.3
12
100
0
56
25
0
7
67
1.15
12648--12757
16
6.8
16
81
6
132
21
17
33
27
1.96
12648--12774
48
2.6
49
78
5
150
21
15
33
29
1.94
12931--12963
11
3.1
11
91
4
50
42
0
3
54
1.15
13666--13844
38
4.6
38
81
4
205
22
30
29
17
1.97
13690--13834
78
1.9
78
97
0
272
23
29
28
17
1.97
14094--14204
18
6.7
16
74
20
95
23
23
33
19
1.97
14082--14185
33
3.2
32
86
5
140
21
24
32
22
1.98
14111--14254
15
9.1
15
77
14
114
22
26
30
20
1.98
14383--14466
38
2.2
38
82
8
98
26
33
23
16
1.96

Tables:   1

The End!