Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010581.1 Corchorus capsularis cultivar CVL-1 contig10602, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30289

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--72
25
2.6
24
82
7
74
21
31
29
17
1.96
49--172
33
3.7
33
81
2
158
22
26
30
20
1.98
111--167
18
3.3
18
71
14
57
21
26
31
21
1.98
312--420
37
3.0
36
77
8
112
26
22
24
25
2.00
1642--1730
36
2.5
36
89
5
135
25
25
33
14
1.94
3554--3682
16
7.9
16
81
6
134
23
16
31
29
1.96
9814--9879
30
2.2
30
89
2
98
19
28
13
37
1.90

Tables:   1

The End!