Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010583.1 Corchorus capsularis cultivar CVL-1 contig10604, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57943

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2465--2497
16
2.1
16
100
0
66
54
12
12
21
1.69
9758--9799
19
2.2
19
83
8
50
76
2
0
21
0.90
9775--9801
14
1.9
14
100
0
54
74
0
0
25
0.83
25868--25904
3
12.3
3
100
0
74
0
32
0
67
0.91
26948--26981
6
5.7
6
96
0
50
35
20
8
35
1.84
28383--28417
11
3.2
11
83
0
52
77
17
5
0
0.96
43494--43631
69
2.0
67
95
2
249
41
18
15
25
1.89
45470--45555
43
2.0
43
93
0
145
31
18
19
30
1.96
51786--52001
42
5.1
42
85
2
272
28
15
31
24
1.96
52265--52423
79
2.0
79
96
0
291
25
16
30
28
1.97
52480--52536
30
1.9
30
85
0
78
31
17
26
24
1.97
52752--52780
6
4.8
6
100
0
58
0
48
0
51
1.00
55439--55508
29
2.4
29
85
2
86
38
28
12
20
1.89

Tables:   1

The End!