Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010588.1 Corchorus capsularis cultivar CVL-1 contig10609, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14534

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4076--4153
20
3.7
20
76
10
68
39
15
12
32
1.85
4055--4262
22
9.7
21
67
16
88
40
18
9
31
1.83
4300--4376
22
3.5
23
82
8
72
35
20
6
37
1.79
4449--4559
22
5.0
22
76
4
89
31
9
13
45
1.76
4449--4567
44
2.7
43
72
10
105
30
9
13
47
1.74
5163--5205
17
2.6
16
82
10
50
34
18
23
23
1.96
5385--5427
17
2.6
16
82
17
52
37
20
20
20
1.95
5133--5557
222
1.9
222
95
0
760
31
24
22
21
1.98
7471--7509
19
2.1
19
95
0
69
20
33
10
35
1.86
9223--9336
57
2.0
57
94
0
201
35
21
6
35
1.79
9894--9918
2
12.5
2
100
0
50
52
0
0
48
1.00
12720--12752
2
16.5
2
100
0
66
51
0
0
48
1.00
13129--13178
23
2.3
21
86
10
66
6
16
0
78
0.95

Tables:   1

The End!