Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010591.1 Corchorus capsularis cultivar CVL-1 contig10612, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  123224

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15358--15389
1
32.0
1
100
0
64
0
0
0
100
0.00
16653--16682
15
2.0
15
100
0
60
13
13
40
33
1.83
22334--22382
3
16.3
3
100
0
98
32
0
0
67
0.91
53750--53814
31
2.2
31
86
5
89
18
21
23
36
1.95
84427--84573
73
2.0
73
100
0
294
23
26
23
27
2.00
84531--84619
44
2.0
44
100
0
178
25
31
20
22
1.98
97712--97806
33
2.6
37
80
16
126
27
15
34
22
1.94
97750--97800
15
3.1
16
68
15
50
25
15
35
23
1.94
109227--109255
12
2.5
12
94
5
51
0
6
41
51
1.28
122137--122193
6
9.5
6
81
7
53
45
3
43
7
1.48

Tables:   1

The End!