Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010594.1 Corchorus capsularis cultivar CVL-1 contig10615, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7895

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1963--2006
22
2.0
22
95
0
79
47
4
6
40
1.50
2228--2283
2
28.5
2
79
16
64
50
3
0
46
1.19
2228--2280
17
3.2
17
84
7
74
50
3
0
45
1.19
2908--2942
4
8.8
4
87
0
52
0
68
5
25
1.11
2908--2942
12
2.9
12
100
0
70
0
68
5
25
1.11
3565--3614
20
2.3
22
83
10
59
66
6
2
26
1.26
4131--4201
37
1.9
37
94
0
124
36
18
8
36
1.81
5388--5449
31
2.0
32
90
3
99
33
19
6
40
1.77
6574--6644
37
1.9
37
94
0
124
36
18
8
36
1.81

Tables:   1

The End!