Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010602.1 Corchorus capsularis cultivar CVL-1 contig10623, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47234

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7274--7342
31
2.2
31
97
0
129
28
17
5
47
1.70
14274--14312
16
2.4
16
84
12
53
76
10
10
2
1.10
14708--14735
6
4.7
6
100
0
56
35
0
0
64
0.94
14924--15239
166
1.9
166
84
3
422
31
18
13
37
1.89
21512--21591
39
2.1
39
100
0
160
37
12
10
40
1.77
22798--22858
29
2.1
29
84
6
79
19
21
18
40
1.91
23049--23126
29
2.7
29
83
2
102
37
16
28
17
1.92
25779--25885
33
3.3
31
80
14
94
12
40
36
11
1.78
25950--26033
32
2.6
32
94
0
141
11
27
44
16
1.83
27796--27935
70
1.9
73
91
7
232
49
2
20
27
1.63
28621--28659
15
2.6
15
87
0
60
28
46
17
7
1.76
29206--29243
2
19.0
2
84
10
51
52
2
0
44
1.14
45089--45350
106
2.5
105
88
4
386
41
9
8
40
1.69
45618--45693
40
1.9
40
91
5
127
30
7
15
46
1.75
45692--45728
13
2.8
13
87
0
56
35
8
37
18
1.81

Tables:   1

The End!