Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010613.1 Corchorus capsularis cultivar CVL-1 contig10634, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12646

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4603--4679
28
2.8
28
93
0
127
44
24
11
19
1.84
7642--7701
22
2.8
21
75
5
66
43
25
8
23
1.81
7685--8219
88
6.1
86
74
8
423
41
19
16
22
1.90
7698--8219
179
3.0
173
84
6
552
40
19
17
22
1.91
7944--7991
21
2.2
22
82
10
55
41
18
14
25
1.88
7844--8225
179
2.2
175
90
5
608
40
18
18
22
1.91
8125--8326
111
1.8
111
91
0
332
43
18
15
22
1.88
8263--8722
88
5.2
88
76
9
409
40
20
17
22
1.92
8401--8442
21
1.9
21
85
9
57
38
26
19
16
1.92
8263--8722
176
2.6
175
78
9
477
40
20
17
22
1.92
8236--8713
264
1.8
264
86
4
705
40
20
16
22
1.91
7666--8721
551
1.9
550
89
4
1646
40
20
16
22
1.91
8738--8787
21
2.4
21
80
3
57
42
26
14
18
1.87
9292--9350
29
2.0
30
83
3
75
33
10
6
49
1.63
11222--11261
21
2.0
20
85
5
53
55
12
10
22
1.67

Tables:   1

The End!