Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010630.1 Corchorus capsularis cultivar CVL-1 contig10651, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19234

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1809--1837
7
4.1
7
100
0
58
13
0
13
72
1.13
3201--3246
16
2.9
16
72
15
51
36
34
21
6
1.80
3782--4046
129
2.0
130
82
6
315
49
1
9
38
1.45
4219--4389
64
2.7
64
91
0
279
22
19
36
21
1.95
4873--5093
108
2.0
108
99
0
433
44
24
13
18
1.85
12373--12790
106
3.9
105
88
5
574
39
11
7
41
1.70
12372--12836
106
4.4
106
86
4
555
40
12
7
40
1.69
17512--17599
29
3.1
29
83
6
126
15
13
28
42
1.86
17522--17615
28
3.3
27
71
12
66
14
13
26
44
1.83
17711--17789
23
3.2
22
68
25
59
22
8
17
50
1.74

Tables:   1

The End!