Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010632.1 Corchorus capsularis cultivar CVL-1 contig10653, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10514

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
727--799
28
2.6
28
97
0
137
13
21
6
57
1.60
805--951
21
6.9
21
73
9
120
21
20
5
52
1.66
655--739
43
2.0
42
83
6
107
20
18
7
54
1.67
801--983
85
2.2
86
76
10
196
20
20
5
53
1.66
1173--1241
32
2.2
31
84
10
86
28
17
5
47
1.70
1250--1510
55
4.8
55
92
2
411
24
18
6
49
1.72
2327--2685
101
3.6
101
95
1
643
36
16
4
43
1.67
2282--2687
51
8.1
51
79
6
436
36
16
4
42
1.70
3512--3564
26
2.0
26
96
0
97
52
7
20
18
1.69
6981--7056
27
2.8
27
86
4
91
40
19
18
21
1.91
7004--7058
27
2.0
27
92
0
92
36
21
21
20
1.95

Tables:   1

The End!