Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010633.1 Corchorus capsularis cultivar CVL-1 contig10654, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17793

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5976--6127
77
1.9
80
82
5
193
43
21
11
24
1.85
9589--9615
14
1.9
14
100
0
54
0
11
0
88
0.50
9804--9901
28
3.7
27
84
10
123
15
23
6
55
1.63
9907--10057
21
6.9
21
73
12
117
21
19
5
53
1.64
9907--10057
43
3.4
43
78
5
176
21
19
5
53
1.64
10186--10485
95
3.2
95
68
15
298
27
20
5
47
1.71
10157--10532
185
2.0
185
98
0
734
26
20
5
47
1.72
10541--10845
55
5.8
55
88
8
440
24
18
6
50
1.71
10737--10833
44
2.2
44
100
0
194
24
19
5
50
1.68
10811--10882
36
2.0
37
94
2
128
23
18
5
52
1.66
10674--10925
96
2.6
93
84
11
300
24
18
5
50
1.69
11620--11821
50
4.1
50
79
5
212
35
15
5
42
1.72
11620--11823
51
4.1
51
78
8
204
35
15
5
42
1.71
14619--14694
27
2.8
27
88
4
100
43
21
15
19
1.88
14642--14696
27
2.0
27
96
0
101
38
21
21
18
1.94
14953--15039
33
2.6
33
98
0
165
8
25
44
21
1.79

Tables:   1

The End!