Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010636.1 Corchorus capsularis cultivar CVL-1 contig10657, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31655

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1188--1241
26
2.1
26
85
0
72
42
22
5
29
1.76
1199--1256
26
2.2
26
81
6
64
41
18
8
31
1.81
845--1329
242
2.0
244
93
0
839
40
16
12
30
1.86
2599--2625
14
1.9
14
100
0
54
29
7
25
37
1.83
14774--14900
60
2.1
60
82
2
148
29
19
19
31
1.97
16073--16986
438
2.1
431
84
5
1067
26
13
17
42
1.86
22831--23018
94
2.0
94
98
0
367
25
17
19
37
1.93
23935--23990
29
1.9
29
89
7
87
16
21
19
42
1.89
24215--24256
20
2.1
21
86
8
61
57
7
7
28
1.52
25737--25996
96
2.7
94
83
4
306
21
21
26
30
1.98

Tables:   1

The End!