Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010637.1 Corchorus capsularis cultivar CVL-1 contig10658, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24928

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--40
2
19.0
2
100
0
76
50
0
0
50
1.00
3144--3262
31
3.8
31
93
1
202
37
31
11
18
1.87
3284--3371
45
2.0
45
97
0
167
34
25
15
25
1.95
5045--5073
6
4.8
6
100
0
58
0
31
0
68
0.89
13969--14055
37
2.6
32
77
18
95
60
8
13
17
1.56
14173--14239
30
2.1
32
86
8
93
50
5
16
26
1.68
15109--15142
17
2.1
16
89
10
52
64
0
11
23
1.26
15253--15311
31
1.9
31
89
0
91
45
5
18
30
1.71
17128--17251
33
3.7
33
81
8
144
23
41
27
7
1.80
18397--18450
20
2.7
21
77
5
58
22
33
22
22
1.97
22136--22213
24
3.4
21
77
18
75
35
7
3
52
1.48
22136--22218
25
3.5
24
81
12
93
37
7
3
51
1.47
22147--22221
24
3.1
23
80
14
89
37
8
4
50
1.50

Tables:   1

The End!