Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010638.1 Corchorus capsularis cultivar CVL-1 contig10659, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19020

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
181--246
30
2.2
30
88
0
96
9
25
43
21
1.81
2136--2240
33
3.2
33
94
0
174
44
17
9
28
1.79
2270--2373
33
3.2
33
78
4
113
46
19
9
25
1.80
5581--5632
15
3.5
15
83
0
59
7
30
28
32
1.85
5607--5721
45
2.6
45
81
2
151
10
25
25
39
1.87
5606--5721
30
3.8
31
68
10
96
10
25
25
39
1.87
6886--7030
18
8.1
18
73
7
98
12
17
40
29
1.86
6896--7030
36
3.8
36
91
0
198
11
16
40
31
1.84
10114--10159
21
2.2
21
85
11
60
4
47
10
36
1.58
11763--11812
22
2.3
23
86
6
68
18
28
28
26
1.98
15522--15592
3
23.7
3
97
0
133
66
0
1
32
1.01
17557--17651
40
2.3
40
81
1
109
40
26
10
23
1.87

Tables:   1

The End!