Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010639.1 Corchorus capsularis cultivar CVL-1 contig10660, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29246

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72--108
2
18.0
2
94
5
65
48
2
0
48
1.15
2581--2637
12
4.8
11
77
10
51
52
10
3
33
1.53
6757--6809
15
3.5
15
86
0
79
24
35
7
32
1.84
8616--8743
65
2.0
65
93
3
222
46
21
11
20
1.82
8992--9990
429
2.3
431
80
7
1065
30
13
12
42
1.82
10675--10728
23
2.4
22
76
14
56
53
3
0
42
1.18
11921--11962
13
3.2
13
86
10
50
11
9
2
76
1.12

Tables:   1

The End!